R/pedigree_settings.R
get_argus_prp_settings.Rd
All input parameters that change with the type of pedigree are returned in a list
get_argus_prp_settings( ps_id_col = "#IDTier", ps_sire_col = "IDVater", ps_dam_col = "IDMutter", ps_bd_col = "Birthdate", ps_sex_col = "Geschlecht", ps_plz_col = "PLZ", ps_introg_col = "introg", ps_inb_col = "inb_gen", ps_cryo_col = "cryo", pn_id_col = 1, pn_sire_col = 2, pn_dam_col = 3, ps_col_delim = "|", pl_dtype = list(col = c("#IDTier", "IDVater", "IDMutter", "Birthdate", "Geschlecht", "PLZ", "introg", "inb_gen", "cryo"), dtp = c("integer", "integer", "integer", "date", "character", "integer", "double", "logical", "integer")) )
ps_id_col | column header for identifiers |
---|---|
ps_sire_col | column header for sire |
ps_dam_col | column header for dam |
ps_bd_col | column header for birthday |
ps_sex_col | column header for sex |
ps_plz_col | column header for postal code |
ps_introg_col | column header for introgression |
ps_inb_col | column header for inbreeding |
ps_cryo_col | column header for cryo conservation |
pn_id_col | column index for id in pedigree |
pn_sire_col | column index for sire in pedigree |
pn_dam_col | column index for dam in pedigree |
ps_col_delim | column delimiter |
pl_dtype | list with datatypes |